08.128.469 Advanced Simulation Techniques

Course offering details

Instructors: Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni

Event type: Lecture

Displayed in timetable as: Adv.simulation techn

Hours per week: 4

Credits: 6,0

Language of instruction: German

Min. | Max. participants: - | -

Requirements / organisational issues:
The course introduces advanced tools and techniques for performing computer simulations. It is a follow up of the introductory course on “Computer Simulations techniques in Statistical Physics”. Familiarity with basic simulation techniques (molecular dynamics or Monte Carlo simulations) is recommended to attend the course.

The lecture will be given in English.
Format: 3V + 1Ü.
Begin: Tuesday, April 22,  10am-12 pm,  Newton-Raum (Staudinger Weg 9, 01-122)

Contents:


  • Introductory to statistical mechanics: Ensembles, error estimates  
  • Free energy calculations: Thermodynamic integration
  • Histogram reweighting and Bennet's acceptance ratio
  • Replica Exchange molecular dynamics, weighted histogram analysis 
  • Umbrella sampling; Principal component analysis 
  • Metadynamics and Hyperdynamics
  • Kinetics: Markov state models, clustering
  • Kinetic networks, commitment probability
  • Rare events
  • Bennet-Chandler approach
  • Transition path ensemble
  • Particle-based coarse-graining: theory
  • Link to liquid state theory
  • Non-equilibrium: ensembles of driven system 
  • Linear response theory, Green-Kubo relations, Jarzinsky equality  
  • Critical phenomena: Ising model
  • Renormalization group analysis 
  • Introduction to Mori-Zwanzig theory
  • Born-Oppenheimer approximation, electronic charge density 
  • Thomas-Fermi approximation to Kohn-Sham DFT 
  • Kohn-Sham equations and basis set expansions 
  • Exchange-correlation functional, derivative discontinuity

Recommended reading list:
Understanding Molecular Simulations, second edition, D. Frenkel & B Smit, Academic Press
Statistical mechanics: Theory and Molecular Simulation, M.E. Tuckermann, Oxford University Press

Appointments
Date From To Room Instructors
1 Tue, 22. Apr. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
2 Th, 24. Apr. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
3 Tue, 29. Apr. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
4 Tue, 6. May 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
5 Th, 8. May 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
6 Tue, 13. May 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
7 Th, 15. May 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
8 Tue, 20. May 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
9 Th, 22. May 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
10 Tue, 27. May 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
11 Tue, 3. Jun. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
12 Th, 5. Jun. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
13 Tue, 10. Jun. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
14 Th, 12. Jun. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
15 Tue, 17. Jun. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
16 Tue, 24. Jun. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
17 Th, 26. Jun. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
18 Tue, 1. Jul. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
19 Th, 3. Jul. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
20 Tue, 8. Jul. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
21 Th, 10. Jul. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
22 Tue, 15. Jul. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
23 Th, 17. Jul. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
24 Tue, 22. Jul. 2014 10:00 12:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
25 Th, 24. Jul. 2014 08:00 10:00 01 122 Newton-Raum Dr. Denis Andrienko; Prof. Dr. Thomas Kühne; Dr. Giovanni Settanni
Course specific exams
Description Date Instructors Mandatory
1. Oral Examination Time tbd No
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Instructors
Dr. Denis Andrienko
Prof. Dr. Thomas Kühne
Dr. Giovanni Settanni